H-D-Ala-D-Ala-D-Ala-D-Ala-OH
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H-D-Ala-D-Ala-D-Ala-D-Ala-OH

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It is a substrate for D-aminopeptidase from Ochrobactrum anthropi.

Category
Others
Catalog number
BAT-015704
CAS number
926-78-3
Molecular Formula
C12H22N4O5
Molecular Weight
302.33
H-D-Ala-D-Ala-D-Ala-D-Ala-OH
IUPAC Name
2-[2-[2-(2-aminopropanoylamino)propanoylamino]propanoylamino]propanoic acid
Synonyms
N-[2-((2-[(2-Aminopropanoyl)amino]propanoyl)amino)propanoyl]alanine; L-Alanine, N-[N-(N-L-alanyl-L-alanyl)-L-alanyl]-; (2-Isopropyl-1H-benzimidazol-1-yl)aceticacid
Purity
95%
Density
1.237g/cm3
Boiling Point
703.1°C at 760mmHg
Sequence
H-DL-Ala-DL-Ala-DL-Ala-DL-Ala-OH
Storage
Store at -20°C
InChI
InChI=1S/C12H22N4O5/c1-5(13)9(17)14-6(2)10(18)15-7(3)11(19)16-8(4)12(20)21/h5-8H,13H2,1-4H3,(H,14,17)(H,15,18)(H,16,19)(H,20,21)
InChI Key
ZHRZLXZJVUFLNY-UHFFFAOYSA-N
Canonical SMILES
CC(C(=O)NC(C)C(=O)NC(C)C(=O)NC(C)C(=O)O)N
1.Insulin treatment attenuates renal ADAM17 and ACE2 shedding in diabetic Akita mice.
Salem ES1, Grobe N, Elased KM. Am J Physiol Renal Physiol. 2014 Mar 15;306(6):F629-39. doi: 10.1152/ajprenal.00516.2013. Epub 2014 Jan 22.
Angiotensin-converting enzyme 2 (ACE2) is located in several tissues and is highly expressed in renal proximal tubules, where it degrades the vasoconstrictor angiotensin II (ANG II) to ANG-(1-7). Accumulating evidence supports protective roles of ACE2 in several disease states, including diabetic nephropathy. A disintegrin and metalloprotease (ADAM) 17 is involved in the shedding of several transmembrane proteins, including ACE2. Our previous studies showed increased renal ACE2, ADAM17 expression, and urinary ACE2 in type 2 diabetic mice (Chodavarapu H, Grobe N, Somineni HK, Salem ES, Madhu M, Elased KM. PLoS One 8: e62833, 2013). The aim of the present study was to determine the effect of insulin on ACE2 shedding and ADAM17 in type 1 diabetic Akita mice. Results demonstrate increased renal ACE2 and ADAM17 expression and increased urinary ACE2 fragments (≈70 kDa) and albumin excretion in diabetic Akita mice. Immunostaining revealed colocalization of ACE2 with ADAM17 in renal tubules.
2.Membrane activation: selective vesicle fusion via small molecule recognition.
Gong Y1, Luo Y, Bong D. J Am Chem Soc. 2006 Nov 15;128(45):14430-1.
We report herein the induction of selective vesicle fusion with biological recognition motifs not natively associated with lipid bilayer fusion, thus broadening the scope of recognition-guided membrane activation. Our system employs vancomycin glycopeptide, coupled to the antimicrobial peptide magainin, and D-Ala-D-Ala-OH dipeptide coupled to a phospholipid derivative, as surface-bound fusogens. Fusion was characterized by dynamic light scattering and FRET experiments with lipid bound fluorophores. We have demonstrated here that appropriately designed membrane anchored molecular recognition motifs have the biomimetic ability to activate specific membrane mergers; this principle has resonance with goals in targeted chemical delivery and nanoscale compartmentalized chemistry.
3.Sequence-dependent binding of dipeptides by an artificial receptor in water.
Schmuck C1, Rupprecht D, Wienand W. Chemistry. 2006 Dec 13;12(36):9186-95.
An artificial dipeptide receptor (1) was designed and observed to bind the deprotonated dipeptide Ac-D-Ala-D-Ala-OH in buffered water with K = 33,100 M(-1), whereas other dipeptides such as Ac-Gly-Gly-OH or Ac-D-Val-D-Val-OH were bound less efficiently, by factors of more than 10 (K < 3000 M(-1)). The efficient binding and the pronounced sequence selectivity are the result of a combination of strong electrostatic contacts and size-discriminating hydrophobic interactions. To provide such a combination, a guanidiniocarbonylpyrrole cation was attached to a novel cyclotribenzylene-substituted alanine derivative 5, to provide a hydrophobic bowl-shaped cavity just large enough to bind a methyl group but not any larger alkyl chains, thus causing the receptor to prefer alanine to valine. We describe the synthesis of 1 and the evaluation of its complexation properties in UV and fluorescence titration studies.
4.Dipeptide structure determination by vibrational circular dichroism combined with quantum chemistry calculations.
Lee KK1, Oh KI, Lee H, Joo C, Han H, Cho M. Chemphyschem. 2007 Oct 22;8(15):2218-26.
The solution structure and the local solvation environments of alanine dipeptide (AD, 1 a) and its isotopomer (AD*, 1 b, 13C on the acetyl end C==O) are studied by using infrared (IR) spectroscopy and vibrational circular dichroism (VCD). From the amide I IR spectra of AD* in various protic solvents, it is found that each of the two carbonyl groups is fully H-bonded to two water molecules. However, the number of alcohol molecules H-bonded to each C==O varies from one to two, and the local solvation environments are asymmetric around the two peptides of AD* in alcohol solutions. The amide I VCD spectra of AD and AD* in D2O are also measured, and a series of density functional theory (DFT, B3LYP/6-311++G**) calculations are performed to obtain the amide I normal-mode rotational strengths of AD and the intrinsic rotational strengths of its two peptide fragments. By combining the VCD-measurement and DFT-calculation results and employing a coupled oscillator theory, we show that the aqueous-solution structure of the dipeptide can be determined.
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