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Protegrin-4

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Protegrin-4 is an antimicrobial peptide found in Sus scrofa (Pig), and has antimicrobial activity.

Category
Functional Peptides
Catalog number
BAT-011489
CAS number
157214-61-4
Molecular Formula
C90H138N32O19S4
Molecular Weight
2100.54
IUPAC Name
(1R,4S,7R,12R,15S,18R,21S,24S,30S)-24-((1H-indol-3-yl)methyl)-N-((S)-1-((2-(((S)-1-amino-5-guanidino-1-oxopentan-2-yl)amino)-2-oxoethyl)amino)-3-methyl-1-oxobutan-2-yl)-15-benzyl-21-((S)-sec-butyl)-7-((6S,15S,18S)-1,6-diamino-15-(3-guanidinopropyl)-1-imino-18-isobutyl-7,10,13,16-tetraoxo-2,8,11,14,17-pentaazanonadecan-19-amido)-30-(3-guanidinopropyl)-4-(4-hydroxybenzyl)-3,6,14,17,20,23,26,29,32-nonaoxo-9,10,34,35-tetrathia-2,5,13,16,19,22,25,28,31-nonaazabicyclo[16.14.4]hexatriacontane-12-carboxamide
Synonyms
PG-4; H-Arg-Gly-Gly-Arg-Leu-Cys(1)-Tyr-Cys(2)-Arg-Gly-Trp-Ile-Cys(2)-Phe-Cys(1)-Val-Gly-Arg-NH2; L-arginyl-glycyl-glycyl-L-arginyl-L-leucyl-L-cysteinyl-L-tyrosyl-L-cysteinyl-L-arginyl-glycyl-L-tryptophyl-L-isoleucyl-L-cysteinyl-L-phenylalanyl-L-cysteinyl-L-valyl-glycyl-L-argininamide (6->15),(8->13)-bis(disulfide); NPG4; Neutrophil peptide 4
Related CAS
163663-18-1 (Protegrins)
Appearance
Lyophilized Powder or Liquid
Purity
>85%
Sequence
RGGRLCYCRGWICFCVGR-NH2 (Disulfide bridge: Cys6-Cys15, Cys8-Cys13)
Storage
Store at -20°C
InChI
InChI=1S/C86H138N32O19S4/c1-9-45(8)68-82(137)115-61-41-141-138-38-58(76(131)109-53(20-14-28-99-85(93)94)71(126)104-36-65(123)108-57(75(130)118-68)32-47-33-101-51-18-11-10-16-49(47)51)113-74(129)56(31-46-22-24-48(119)25-23-46)111-77(132)59(112-73(128)55(30-42(2)3)110-72(127)54(21-15-29-100-86(95)96)107-63(121)35-102-62(120)34-103-70(125)50(87)17-12-26-97-83(89)90)39-139-140-40-60(114-81(136)67(44(6)7)117-79(61)134)78(133)116-66(43(4)5)80(135)105-37-64(122)106-52(69(88)124)19-13-27-98-84(91)92/h10-11,16,18,22-25,33,42-45,50,52-61,66-68,101,119H,9,12-15,17,19-21,26-32,34-41,87H2,1-8H3,(H2,88,124)(H,102,120)(H,103,125)(H,104,126)(H,105,135)(H,106,122)(H,107,121)(H,108,123)(H,109,131)(H,110,127)(H,111,132)(H,112,128)(H,113,129)(H,114,136)(H,115,137)(H,116,133)(H,117,134)(H,118,130)(H4,89,90,97)(H4,91,92,98)(H4,93,94,99)(H4,95,96,100)/t45-,50-,52-,53-,54-,55-,56-,57-,58-,59-,60-,61-,66-,67-,68-/m0/s1
InChI Key
DUDXZJRHGONAAZ-ZFOLPASKSA-N
Canonical SMILES
CCC(C)C1C(=O)NC2CSSCC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)N1)CC3=CNC4=CC=CC=C43)CCCNC(=N)N)NC(=O)C(NC(=O)C(CSSCC(NC(=O)C(NC2=O)C(C)C)C(=O)NC(C(C)C)C(=O)NCC(=O)NC(CCCNC(=N)N)C(=O)N)NC(=O)C(CC(C)C)NC(=O)C(CCCNC(=N)N)NC(=O)CNC(=O)CNC(=O)C(CCCNC(=N)N)N)CC5=CC=C(C=C5)O
1. Identification of a new member of the protegrin family by cDNA cloning
C Zhao, L Liu, R I Lehrer FEBS Lett. 1994 Jun 13;346(2-3):285-8. doi: 10.1016/0014-5793(94)00493-5.
The porcine leukocyte protegrins are a family of cysteine-rich antimicrobial peptides the primary structures of which combine features of defensins and tachyplesins. We cloned three protegrins from porcine bone marrow mRNA by PCR, including one (PG-4) that was previously unknown. The 691 bp protegrin cDNAs were > 98.8% identical, and each was surrounded by highly conserved 5' and (in some instances) 3' sequences present in structurally dissimilar antimicrobial and LPS-binding peptides of animal leukocytes.
2. Mammalian antimicrobial peptide protegrin-4 self assembles and forms amyloid-like aggregates: Assessment of its functional relevance
Shalini Gour, Vijay Kumar, Ashutosh Singh, Kundlik Gadhave, Pankaj Goyal, Janmejay Pandey, Rajanish Giri, Jay Kant Yadav J Pept Sci. 2019 Mar;25(3):e3151. doi: 10.1002/psc.3151. Epub 2019 Feb 3.
Protegrin-4 (PG-4) is a member of the porcine leukocyte protegrins family of cysteine-rich antimicrobial peptides (AMPs) isolated from Sus scrofa. It consists of 18 amino acid residues and works as a part of innate immune system. In this study, we examined the intrinsic aggregation propensity of this AMP using multiple computational algorithms, namely, TANGO, AGGRESCAN, FOLDAMYLOID, AMYLPRED, and ZYGGREGATOR, and found that the peptide is predicted to have a high propensity for the β sheet formation that disposes this peptide to be amyloidogenic. Under in vitro conditions, PG-4 formed visible aggregates and displayed the hallmark properties of typical amyloids such as enhanced binding of Congo red, increased fluorescence with Thioflavin-T, and fibrillar morphology under transmission electron microscopy. Then we examined its antimicrobial activity against Bacillus subtilis and found that the aggregated peptide retained its antimicrobial activity. Additionally, the aggregates remain non-toxic to the HEK293 and Caco2 cells. Our study suggests that the inherent aggregation properties of AMP can rationally be explored as a potential source of peptide-based antimicrobials with enhanced stability.
3. MALDI MSI Reveals the Spatial Distribution of Protein Markers in Tracheobronchial Lymph Nodes and Lung of Pigs after Respiratory Infection
Tomas Do, Roman Guran, Rea Jarosova, Petra Ondrackova, Zbysek Sladek, Martin Faldyna, Vojtech Adam, Ondrej Zitka Molecules. 2020 Dec 3;25(23):5723. doi: 10.3390/molecules25235723.
Respiratory infections are a real threat for humans, and therefore the pig model is of interest for studies. As one of a case for studies, Actinobacillus pleuropneumoniae (APP) caused infections and still worries many pig breeders around the world. To better understand the influence of pathogenic effect of APP on a respiratory system-lungs and tracheobronchial lymph nodes (TBLN), we aimed to employ matrix-assisted laser desorption/ionization time-of-flight mass spectrometry imaging (MALDI-TOF MSI). In this study, six pigs were intranasally infected by APP and two were used as non-infected control, and 48 cryosections have been obtained. MALDI-TOF MSI and immunohistochemistry (IHC) were used to study spatial distribution of infectious markers, especially interleukins, in cryosections of porcine tissues of lungs (necrotic area, marginal zone) and tracheobronchial lymph nodes (TBLN) from pigs infected by APP. CD163, interleukin 1β (IL‑1β) and a protegrin-4 precursor were successfully detected based on their tryptic fragments. CD163 and IL‑1β were confirmed also by IHC. The protegrin-4 precursor was identified by MALDI-TOF/TOF directly on the tissue cryosections. CD163, IL‑1β and protegrin‑4 precursor were all significantly (p < 0.001) more expressed in necrotic areas of lungs infected by APP than in marginal zone, TBLN and in control lungs.
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